PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN07252.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 179aa    MW: 20312.2 Da    PI: 9.1631
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN07252.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.12.3e-11960255
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55
                r+  + +E++RR+++++ f++L +++P++   +s+   s  +   +A++YIk+Lq
  KHN07252.1  9 RTDTKSIEQNRRNQMKDLFSKLNSVVPHQ---SSREaTSQPDKIGEATNYIKNLQ 60
                677789**********************8...56666*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.36E-12572IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.15E-6564No hitNo description
PROSITE profilePS5088811.02759IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.3E-8960IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.9E-11973IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.3E-61365IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    Send to blast
MENNPSSSRT DTKSIEQNRR NQMKDLFSKL NSVVPHQSSR EATSQPDKIG EATNYIKNLQ  60
IKLEKMKEKR NNLIDIERSK NASMNMGLKS PQFKIQQMGS ALEIVLVTGM DCQFMFAWQN  120
IFFLTETIRA LQEEGYDIVN ASYTVVENAV FHTIHCQVGG SANGALRISE KIKKYLNGC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150346e-43AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003528456.21e-119PREDICTED: uncharacterized protein LOC100810793
TrEMBLA0A0B2PIA31e-133A0A0B2PIA3_GLYSO; Transcription factor bHLH125
STRINGGLYMA07G31710.21e-100(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9063498
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.19e-40bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]